Changelog • fxtas

fxtas (development version)

Moved manuscript to analyses/ (#69)
Tons of polishing (#63, #64, #65)
Added gtsummary::bold_labels() to gtsummary tables
Added keywords
Reduced title to under 100 characters, including spaces
Removed numbers from headings.
Incorporated coauthors’ feedback up to 2024/11/18 draft
Added additional line-graph comparison subfigures for latent subtype clustering analysis
Added more interpretation of subtype analysis results
Removed repeated measures analysis

added info about displayed statistics to rows for compute_prob_correct() (#56)

added red reference line at 3 obs per stage in stage_barplot() (#91)
added grayscale legend to PVDs (#83)
added test for pvd_lineplot() (#68)
added biomarker_order argument to compact_pvd_data_prep() (default behavior should be unchanged)
added shared_flextable_settings() function to apply font, font size, and line spacing to all tables

added tools for finding journals to submit to (#66)
renamed FXTAS Stage (0-5)* to FXTAS Stage
added columns to pre-processed data:
- Male
- CGG 100-199
- CGG 55-99
substituted ≤ instead of <= in dichotomized CANTAB variable value labels
renamed SCID composite vars without capitalization (on Dr. Bourgeois’s recommendation)
added “label” attribute to FX3*
added “Disorder” suffix to SCID composite variables, on Dr. Bourgeois’s recommendation.
fixed create_any_tremor() to handle NAs before or after fix_factors().
renamed “Any Autoimmune” to “any autoimmune disorder” and make it “Yes”/“No”
decapitalized “MMSE Total Score” to “MMSE total score”
decapitalized “Parkinsonian features” to “parkinsonian features”
removed “Parkinsonian features:” prefix from:
- “Masked faces”,
- “Increased tone”,
- “Pill-rolling tremor”,
- “Stiff gait”
Renamed “CGG (backfilled)” to CGG
Renamed “ApoE (backfilled)” to ApoE
Now using most recent ApoE value