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Format results list extracted from pickle file

Usage

format_results_list(
  results,
  biomarker_labels = names(biomarker_levels),
  biomarker_levels = NULL,
  biomarker_events_table = get_biomarker_events_table(biomarker_levels),
  biomarker_event_names = get_biomarker_event_names(biomarker_events_table),
  format_sst = TRUE,
  n_s = get_n_subtypes(results),
  subtype_order = seq_len(n_s),
  biomarker_groups
)

Arguments

results

pickle file contents

biomarker_labels

biomarker labels

biomarker_levels

biomarker levels

biomarker_events_table

table of biomarker events (excluding base level)

biomarker_event_names

vector of biomarker event names

format_sst

should the subtype and stage table be formatted? (doesn't work for cross-validation fold pickle-files)

n_s

number of latent subgroups

subtype_order

integer indicating how to reorder the subtypes

biomarker_groups

a list

Value

a "SuStaIn_model" object (extends list())